Basic Information
Locus ID:
CH03.4757
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 56077612 | 56079389 | - | CH03.4757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 54,560.89 Da | 51.10 | 79.28 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 66 | 101 | 1.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 62 | 110 | 4.71E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 63 | 100 | 7.9E-10 | - |
| SMART | SM00256 | fbox_2 | 64 | 104 | 3.6E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 181 | 419 | 6.2E-16 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 58 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62660.1 | F-box and associated interaction domains-containing protein. | 4.51E-6 |
| RefSeq | XP_034592004.1 | putative F-box protein At4g38870 [Setaria viridis] | 1.61E-198 |
| TrEMBL | A0A4U6WA65 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G118300v2 PE=4 SV=1 | 2.63E-196 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology