Basic Information
Locus ID:
CH03.4751
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 56041216 | 56044444 | + | CH03.4751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 109,362.76 Da | 33.83 | 100.71 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 407 | 465 | 1.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 1.4E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 526 | 585 | 1.7E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 309 | 368 | 4.4E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 930 | 2.2E-41 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 252 | 589 | 2.43E-72 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 347 | 1.43E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 993 | 2.56E-65 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 376 | 621 | 1.3E-69 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 1004 | 1.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 801 | 4.6E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 274 | 5.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 375 | 5.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 175 | 2.3E-39 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 993 | 1.3E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 4.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 453 | 476 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 360.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1000 | 35.792248 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 734 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 993 | 1014 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 7.27E-157 |
| RefSeq | XP_025804564.1 | MDIS1-interacting receptor like kinase 1-like [Panicum hallii] | 6.38E-256 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 7.05E-156 | |
| TrEMBL | A0A2S3GKF2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G007400 PE=3 SV=1 | 1.44E-254 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology