Basic Information
Locus ID:
CH03.4734
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 55844685 | 55845962 | + | CH03.4734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 48,907.72 Da | 45.04 | 80.33 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 52 | 1.0E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 95 | 3.66E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 51 | 5.6E-8 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 2.4E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 132 | 335 | 5.5E-16 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62510.1 | F-box family protein. | 4.85E-11 |
| RefSeq | XP_021315851.1 | putative F-box protein At2g02030 isoform X2 [Sorghum bicolor] | 2.42E-190 |
| Q9FJJ4 | F-box protein At5g62510 OS=Arabidopsis thaliana OX=3702 GN=At5g62510 PE=2 SV=1 | 4.81E-10 | |
| TrEMBL | A0A835AU38 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_047288 PE=4 SV=1 | 7.2E-202 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology