Basic Information
Locus ID:
CH03.469
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 6068803 | 6069527 | + | CH03.469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 20,336.38 Da | 62.72 | 72.49 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 29 | 126 | 3.77721E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 41 | 120 | 5.0E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 26 | 126 | 5.2E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 26 | 131 | 6.8E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 28 | 128 | 34.89505 | IPR003245 |
| ProSiteProfiles | PS51318 | Twin arginine translocation (Tat) signal profile. | 1 | 27 | 7.679487 | IPR006311 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 6.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 161 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60270.1 | Cupredoxin superfamily protein. | 2.79E-19 |
| RefSeq | XP_039797399.1 | basic blue protein-like [Panicum virgatum] | 3.34E-63 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 2.49E-24 | |
| TrEMBL | A0A3L6QRA9 | Basic blue protein-like OS=Panicum miliaceum OX=4540 GN=C2845_PM04G02950 PE=4 SV=1 | 1.92E-62 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology