Basic Information
Locus ID:
CH03.468
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 6065784 | 6066453 | + | CH03.468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 16,844.25 Da | 28.16 | 85.35 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 25 | 124 | 4.17118E-38 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 40 | 118 | 8.0E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 126 | 5.92E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 25 | 135 | 9.1E-32 | IPR008972 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | - |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 25 | 126 | 34.518051 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034580652.1 | basic blue protein-like [Setaria viridis] | 1.47E-57 |
| TrEMBL | A0A4U6VNC3 | Phytocyanin domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G048100v2 PE=4 SV=1 | 3.32E-56 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology