Basic Information
Locus ID:
CH03.466
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 6044966 | 6045568 | + | CH03.466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 16,040.15 Da | 62.89 | 68.97 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 28 | 125 | 2.60429E-37 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 39 | 119 | 4.2E-17 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 125 | 4.08E-29 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 128 | 2.9E-27 | IPR008972 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 27 | 127 | 30.591562 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039797399.1 | basic blue protein-like [Panicum virgatum] | 1.59E-55 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 1.39E-13 | |
| TrEMBL | A0A3L6QRA9 | Basic blue protein-like OS=Panicum miliaceum OX=4540 GN=C2845_PM04G02950 PE=4 SV=1 | 8.69E-60 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology