Basic Information
Locus ID:
CH03.4486
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CAX6
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 53657023 | 53659874 | - | CH03.4486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 42,800.93 Da | 29.96 | 108.16 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 243 | 383 | 2.4E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 94 | 249 | 9.9E-17 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 122 | 386 | 1.1E-33 | IPR044880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 1.53E-152 |
| RefSeq | XP_034606152.1 | putative vacuolar cation/proton exchanger 4 isoform X1 [Setaria viridis] | 1.55E-254 |
| Q6YXZ1 | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0138900 PE=3 SV=1 | 2.02E-165 | |
| TrEMBL | A0A4U6W654 | Vacuolar cation/proton exchanger OS=Setaria viridis OX=4556 GN=SEVIR_1G090800v2 PE=3 SV=1 | 3.51E-253 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology