halophFGD

Basic Information

Locus ID: CH03.4238

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Protein of unknown function (DUF1668)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH03	51614369	51615535	-	CH03.4238

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.33	41,912.71 Da	49.12	67.71	-0.44

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07893	Protein of unknown function (DUF1668)	5	375	3.0E-87	IPR012871
MobiDBLite	mobidb-lite	consensus disorder prediction	35	81	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	44	62	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025821357.1	uncharacterized protein LOC112897297 [Panicum hallii]	2.65E-97
TrEMBL	A0A835B565	Genome assembly, chromosome: II OS=Digitaria exilis OX=1010633 GN=HU200_046066 PE=4 SV=1	6.49E-137

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	26	AH01.5374, AH01.549, AH01.564, AH03.3691, AH03.3704, CH01.12 ... BH01.166, BH01.246, BH01.369, BH03.3974, BH03.3977, BH07.590, CH02.3353, CH03.4141, CH03.4142, CH03.4238, CH03.4239, CH03.4240, CH03.4242, CH03.4244, CH03.4251, CH03.4252, CH07.444, CH07.460, CH09.2578, CH09.2601
Poaceae	Eleusine coracana subsp. coracana	22	gene-QOZ80_3AG0208510, gene-QOZ80_3AG0210820 ... gene-QOZ80_3BG0253610, gene-QOZ80_3BG0256020, gene-QOZ80_7AG0574530, gene-QOZ80_7AG0576210, gene-QOZ80_7AG0577100, gene-QOZ80_7AG0577120, gene-QOZ80_7AG0577150, gene-QOZ80_7AG0577170, gene-QOZ80_7AG0577180, gene-QOZ80_7AG0577220, gene-QOZ80_7BG0605930, gene-QOZ80_7BG0607650, gene-QOZ80_7BG0608510, gene-QOZ80_7BG0608520, gene-QOZ80_7BG0608550, gene-QOZ80_7BG0608560, gene-QOZ80_7BG0608570, gene-QOZ80_7BG0608610, gene-QOZ80_7BG0608620, gene-QOZ80_7BG0608640
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0208490.1.CDS1 ... HORVU.MOREX.r3.3HG0294740.1.CDS1
Poaceae	Lolium multiflorum	8	gene-QYE76_002553, gene-QYE76_002781, gene-QYE76_037292 ... gene-QYE76_059641, gene-QYE76_059651, gene-QYE76_059653, gene-QYE76_063289, gene-QYE76_063310
Poaceae	Oryza coarctata	7	Oco05G002870, Oco06G002880, Oco06G025610, Oco09G001310 ... Oco13G014260, Oco14G014700, Oco22G000390
Poaceae	Oryza sativa	18	LOC_Os01g70280.1, LOC_Os01g70290.1, LOC_Os03g01420.1 ... LOC_Os03g01490.1, LOC_Os03g05370.1, LOC_Os03g05380.1, LOC_Os04g34900.1, LOC_Os04g58030.1, LOC_Os04g58050.1, LOC_Os05g03490.1, LOC_Os05g03520.1, LOC_Os05g23450.2, LOC_Os06g08990.1, LOC_Os06g09020.1, LOC_Os07g45150.1, LOC_Os07g45340.1, LOC_Os09g33890.1, LOC_Os10g08610.1
Poaceae	Paspalum vaginatum	5	gene-BS78_01G205300, gene-BS78_07G002900 ... gene-BS78_07G003300, gene-BS78_10G276800, gene-BS78_10G276900
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0101849, Pt_Chr0602412
Poaceae	Sporobolus alterniflorus	5	Chr19G002260, Chr24G015290, Chr27G015030, Chr27G015830 ... Chr28G008790
Poaceae	Thinopyrum elongatum	6	Tel2E01G890000, Tel2E01G890400, Tel3E01G168300 ... Tel3E01G508400, Tel4E01G175100, Tel4E01G176400
Poaceae	Triticum dicoccoides	3	gene_TRIDC3AG045890, gene_TRIDC3BG051990 ... gene_TRIDC4AG032840
Poaceae	Triticum aestivum	18	TraesCS2A02G001600.1, TraesCS2A02G543800.1 ... TraesCS2B02G020700.1.cds1, TraesCS2B02G116500.1, TraesCS2D02G001900.1.cds1, TraesCS2D02G525800.1, TraesCS3A02G096400.1.cds1, TraesCS3A02G320000.1.cds1, TraesCS3B02G112200.1.cds1, TraesCS3B02G346200.1.cds1, TraesCS3B02G346300.1.cds1, TraesCS3D02G096900.1.cds1, TraesCS4A02G206500.1.cds1, TraesCS4D02G106400.1.cds1, TraesCS4D02G106500.1, TraesCS6A02G317400.1.cds1, TraesCS6A02G317800.1.cds1, TraesCS6D02G296800.1.cds1