HalophFGD

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Basic Information
Locus ID: CH03.3841
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH03 48538099 48539866 - CH03.3841
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.14 47,572.74 Da 48.94 86.79 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 39 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044399546.1 uncharacterized protein LOC123123151 [Triticum aestivum] 1.03E-139
TrEMBL A0A835E9H0 DUF295 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_051671 PE=4 SV=1 1.91E-139
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 35 AH01.1293, AH01.161, AH03.3402, AH03.3403, AH03.3408 ...
AH03.3412, AH03.3533, AH07.2751, AH07.2838, AH07.352, BH03.20, BH03.3610, BH03.3632, BH03.3635, BH03.3636, BH03.3645, BH03.3646, BH03.3647, BH03.3648, BH03.3655, BH03.3658, BH03.3914, BH07.3579, BH07.457, CH01.3317, CH01.481, CH03.3840, CH03.3841, CH03.3842, CH03.3843, CH03.3847, CH03.3850, CH07.2620, CH07.352, Contig181.178
Poaceae Eleusine coracana subsp. coracana 21 gene-QOZ80_2AG0101160, gene-QOZ80_2AG0103070 ...
gene-QOZ80_2BG0154530, gene-QOZ80_3AG0218720, gene-QOZ80_3BG0291830, gene-QOZ80_3BG0291860, gene-QOZ80_7AG0573490, gene-QOZ80_7AG0573510, gene-QOZ80_7AG0573530, gene-QOZ80_7AG0573600, gene-QOZ80_7AG0573620, gene-QOZ80_7AG0573700, gene-QOZ80_7AG0573710, gene-QOZ80_7AG0573770, gene-QOZ80_7AG0574200, gene-QOZ80_7AG0574440, gene-QOZ80_7BG0604890, gene-QOZ80_7BG0604940, gene-QOZ80_7BG0604990, gene-QOZ80_7BG0605040, gene-QOZ80_7BG0605470
Poaceae Hordeum vulgare 14 HORVU.MOREX.r3.1HG0023710.1.CDS1 ...
HORVU.MOREX.r3.1HG0069590.1, HORVU.MOREX.r3.2HG0113130.1, HORVU.MOREX.r3.3HG0250590.1.CDS1, HORVU.MOREX.r3.3HG0308660.1.CDS1, HORVU.MOREX.r3.3HG0310420.1.CDS1, HORVU.MOREX.r3.3HG0326540.1.CDS1, HORVU.MOREX.r3.3HG0326600.1.CDS1, HORVU.MOREX.r3.3HG0326630.1.CDS1, HORVU.MOREX.r3.3HG0326680.1.CDS1, HORVU.MOREX.r3.5HG0466100.1.CDS1, HORVU.MOREX.r3.5HG0517890.1.CDS1, HORVU.MOREX.r3.6HG0620800.1.CDS1, HORVU.MOREX.r3.7HG0712670.1.CDS1
Poaceae Lolium multiflorum 22 gene-QYE76_008733, gene-QYE76_025107, gene-QYE76_029964 ...
gene-QYE76_029966, gene-QYE76_029976, gene-QYE76_029979, gene-QYE76_038729, gene-QYE76_038810, gene-QYE76_038873, gene-QYE76_040101, gene-QYE76_040103, gene-QYE76_040107, gene-QYE76_040548, gene-QYE76_050172, gene-QYE76_053294, gene-QYE76_054431, gene-QYE76_060850, gene-QYE76_061374, gene-QYE76_061460, gene-QYE76_061461, gene-QYE76_071671, gene-QYE76_071673
Poaceae Oryza coarctata 8 Oco08G002540, Oco13G009050, Oco13G010880, Oco13G011070 ...
Oco14G009470, Oco14G011620, Oco14G011660, Oco14G011820
Poaceae Oryza sativa 12 LOC_Os03g57830.1, LOC_Os05g03210.1, LOC_Os05g12080.1 ...
LOC_Os05g45470.1, LOC_Os07g25790.1, LOC_Os07g34620.1, LOC_Os07g38480.1, LOC_Os07g38980.1, LOC_Os07g39000.1, LOC_Os07g39040.1, LOC_Os07g39370.1, LOC_Os10g41850.1
Poaceae Paspalum vaginatum 8 gene-BS78_01G237600, gene-BS78_01G252300 ...
gene-BS78_02G322800, gene-BS78_02G390800, gene-BS78_02G390900, gene-BS78_04G206600, gene-BS78_06G213700, gene-BS78_10G158900
Poaceae Puccinellia tenuiflora 31 Pt_Chr0103037, Pt_Chr0103039, Pt_Chr0103041, Pt_Chr0103044 ...
Pt_Chr0104468, Pt_Chr0108086, Pt_Chr0206737, Pt_Chr0304540, Pt_Chr0304576, Pt_Chr0304613, Pt_Chr0305178, Pt_Chr0404899, Pt_Chr0404901, Pt_Chr0404902, Pt_Chr0404903, Pt_Chr0404909, Pt_Chr0500205, Pt_Chr0500263, Pt_Chr0502246, Pt_Chr0600143, Pt_Chr0600970, Pt_Chr0600971, Pt_Chr0600995, Pt_Chr0600996, Pt_Chr0601001, Pt_Chr0601002, Pt_Chr0601005, Pt_Chr0601006, Pt_Chr0601534, Pt_Chr0605861, Pt_Chr0704343
Poaceae Sporobolus alterniflorus 4 Chr17G014940, Chr19G003580, Chr24G011050, Chr27G013670
Poaceae Thinopyrum elongatum 13 Tel2E01G1055200, Tel2E01G202700, Tel2E01G238300 ...
Tel3E01G227400, Tel3E01G305200, Tel3E01G869200, Tel3E01G869500, Tel3E01G871000, Tel5E01G054600, Tel5E01G674900, Tel6E01G603200, Tel7E01G431200, Tel7E01G431300
Poaceae Triticum dicoccoides 6 gene_TRIDC2AG010800, gene_TRIDC2BG013120 ...
gene_TRIDC2BG013140, gene_TRIDC3AG073340, gene_TRIDC5AG003200, gene_TRIDC5AG062240
Poaceae Triticum aestivum 41 TraesCS2A02G093900.1.cds1, TraesCS2A02G533600.1 ...
TraesCS2B02G108400.1, TraesCS2B02G108500.1, TraesCS2B02G108600.1, TraesCS2D02G111000.1.cds1, TraesCS3A02G426900.1, TraesCS3A02G452700.1.cds1, TraesCS3A02G518200.1.cds1, TraesCS3B02G442600.1, TraesCS3B02G463600.1, TraesCS3B02G464800.1.cds1, TraesCS3B02G489900.1, TraesCS3B02G490100.1.cds1, TraesCS3D02G422400.1, TraesCS3D02G525400.1.cds1, TraesCS3D02G525500.1.cds1, TraesCS3D02G525600.1.cds1, TraesCS4B02G201300.1, TraesCS5A02G431700.2, TraesCS5A02G431800.1.cds1, TraesCS5B02G433400.1.cds1, TraesCS5B02G433500.1.cds1, TraesCS5B02G433900.1.cds1, TraesCS5D02G431200.1.cds1, TraesCS5D02G439400.1.cds1, TraesCS5D02G439700.1.cds1, TraesCS6B02G274700.1.cds1, TraesCS6B02G370700.1, TraesCS6B02G371100.1, TraesCS6D02G232500.1.cds1, TraesCS7A02G244500.1.cds1, TraesCS7A02G443300.1.cds1, TraesCS7B02G072200.1.cds1, TraesCS7B02G342100.2.cds1, TraesCS7D02G243100.1.cds1, TraesCS7D02G344600.1.cds1, TraesCS7D02G432500.1.cds1, TraesCSU02G096800.1.cds1, TraesCSU02G226800.1, TraesCSU02G251700.1
Poaceae Zea mays 3 Zm00001eb037910_P001, Zm00001eb142070_P001 ...
Zm00001eb330670_P001
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