Basic Information
Locus ID:
CH03.3825
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 48454864 | 48458931 | - | CH03.3825 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 61,642.85 Da | 41.91 | 107.41 | 0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 142 | 304 | 1.4E-30 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 93 | 560 | 1.12E-64 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 104 | 560 | 7.5E-77 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 109 | 559 | 40.833809 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 435 | 450 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 5.39E-163 |
| RefSeq | XP_004958088.1 | organic cation/carnitine transporter 7 [Setaria italica] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 5.18E-162 | |
| TrEMBL | K3ZST6 | MFS domain-containing protein OS=Setaria italica OX=4555 GN=101779805 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology