Basic Information
Locus ID:
CH03.3824
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 48452399 | 48453196 | - | CH03.3824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 24,941.81 Da | 27.60 | 109.35 | 0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 124 | 203 | 1.9E-7 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 14 | 206 | 1.83E-19 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 24 | 214 | 2.2E-23 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 29 | 230 | 17.694117 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 4.22E-53 |
| RefSeq | XP_039831486.1 | organic cation/carnitine transporter 7-like isoform X2 [Panicum virgatum] | 4.02E-77 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 4.12E-52 | |
| TrEMBL | A0A5J9SLA5 | MFS domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_54871 PE=4 SV=1 | 9.09E-80 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology