Basic Information
Locus ID:
CH03.3805
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 48296365 | 48299425 | - | CH03.3805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 61,271.24 Da | 36.52 | 79.06 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15898 | EFh_PI-PLC | 375 | 507 | 6.70677E-15 | - |
| CDD | cd05117 | STKc_CAMK | 68 | 326 | 8.07583E-140 | - |
| CDD | cd00051 | EFh | 446 | 508 | 1.91265E-16 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 69 | 327 | 9.7E-76 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 393 | 437 | 4.5E-5 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 445 | 508 | 1.1E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 355 | 534 | 3.15E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 339 | 1.75E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 335 | 1.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 154 | 6.5E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 336 | 510 | 2.1E-49 | - |
| SMART | SM00054 | efh_1 | 446 | 474 | 0.092 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 1.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 0.011 | IPR002048 |
| SMART | SM00220 | serkin_6 | 69 | 327 | 8.6E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 482 | 510 | 1.2E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 14.569197 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 8.766953 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 327 | 49.049938 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 477 | 12.477041 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 13.034948 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 383 | 395 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 455 | 467 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 2.72E-287 |
| RefSeq | XP_039831285.1 | calcium-dependent protein kinase 20-like [Panicum virgatum] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0WCC8 | Calcium-dependent protein kinase 7 OS=Panicum virgatum OX=38727 GN=PVAP13_2KG498300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology