Basic Information
Locus ID:
CH03.3782
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 48102472 | 48119018 | - | CH03.3782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 194,051.69 Da | 46.70 | 78.74 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04369 | Bromodomain | 1231 | 1295 | 3.43192E-9 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 75 | 6.6E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 208 | 1.0E-7 | IPR001611 |
| Pfam | PF05212 | Protein of unknown function (DUF707) | 1438 | 1747 | 5.9E-125 | IPR007877 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 513 | 776 | 1.7E-31 | IPR001245 |
| Pfam | PF00439 | Bromodomain | 1204 | 1284 | 5.2E-6 | IPR001487 |
| SUPERFAMILY | SSF47370 | Bromodomain | 1187 | 1298 | 1.7E-12 | IPR036427 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 484 | 776 | 6.29E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 243 | 3.33E-35 | - |
| Gene3D | G3DSA:1.20.920.10 | - | 1189 | 1308 | 2.1E-11 | IPR036427 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 581 | 7.8E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 260 | 1.6E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 796 | 1.7E-47 | - |
| SMART | SM00297 | bromo_6 | 1191 | 1300 | 1.2E-5 | IPR001487 |
| SMART | SM00220 | serkin_6 | 505 | 777 | 4.5E-10 | IPR000719 |
| ProSiteProfiles | PS50014 | Bromodomain profile. | 1231 | 1281 | 8.5244 | IPR001487 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 505 | 779 | 27.735867 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1029 | 1063 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 995 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1749 | 1769 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1689 | 1721 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1689 | 1710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1316 | 1401 | - | - |
| Coils | Coil | Coil | 903 | 930 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 2.15E-147 |
| RefSeq | XP_034579964.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Setaria viridis] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 2.08E-146 | |
| TrEMBL | A0A1E5VPQ0 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011872 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology