Basic Information
Locus ID:
CH03.3656
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 46834831 | 46838064 | + | CH03.3656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 74,053.85 Da | 43.81 | 93.04 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 367 | 632 | 9.34593E-88 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 171 | 260 | 1.8E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 362 | 569 | 9.7E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 38 | 130 | 1.1E-18 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 342 | 630 | 2.16E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 133 | 1.8E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 160 | 263 | 5.3E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 638 | 1.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 436 | 4.2E-33 | - |
| SMART | SM00220 | serkin_6 | 361 | 629 | 1.0E-35 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 155 | 264 | 14.135304 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 133 | 19.892441 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 645 | 39.113739 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 482 | 494 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 367 | 389 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 5.67E-128 |
| RefSeq | XP_034581017.1 | uncharacterized protein LOC117844417 [Setaria viridis] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 3.23E-156 | |
| TrEMBL | A0A4U6VYM4 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G352400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology