Basic Information
Locus ID:
CH03.3635
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 46633944 | 46636857 | + | CH03.3635 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 76,255.38 Da | 42.48 | 82.66 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 376 | 639 | 5.63291E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 27 | 125 | 7.2E-18 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 371 | 576 | 2.4E-42 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 254 | 1.4E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 639 | 3.1E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 257 | 2.9E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 19 | 129 | 2.7E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 345 | 442 | 1.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 648 | 1.2E-58 | - |
| SMART | SM00220 | serkin_6 | 370 | 641 | 1.6E-23 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 150 | 257 | 17.665625 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 639 | 35.467167 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 22 | 129 | 19.738554 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 488 | 500 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 341 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20. Encodes a cysteine-rich receptor-like protein kinase. | 6.24E-133 |
| RefSeq | XP_004957923.2 | uncharacterized protein LOC101782077 [Setaria italica] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 3.2E-133 | |
| TrEMBL | A0A2T7EWX8 | Cysteine-rich receptor-like protein kinase 25 OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G385900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3243, BH03.3430, CH03.3635, CH03.3636 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570270, gene-QOZ80_7AG0570320 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0139040.1, HORVU.MOREX.r3.7HG0638110.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040820, gene-QYE76_040848 |
| Poaceae | Oryza coarctata | 2 | Oco13G009240, Oco14G009630 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g35140.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G301000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304253 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005260, Chr27G012000 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G1046700, Tel2E01G404800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028890, gene_TRIDC2BG032550 |
| Poaceae | Triticum aestivum | 7 | TraesCS2A02G217200.1, TraesCS2A02G562800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb323230_P001, Zm00001eb323240_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-819 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6572 |