Basic Information
Locus ID:
CH03.3633
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 46611349 | 46615473 | + | CH03.3633 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 76,701.74 Da | 41.05 | 88.26 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 244 | 1.1E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 382 | 559 | 1.4E-25 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 23 | 121 | 1.9E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 588 | 2.56E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 572 | 3.7E-53 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 152 | 246 | 6.3E-17 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 323 | 377 | 7.8E-7 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 19 | 130 | 1.9E-10 | IPR038408 |
| SMART | SM00220 | serkin_6 | 340 | 560 | 4.6E-10 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 17 | 130 | 12.524031 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 263 | 567 | 23.947956 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 139 | 247 | 13.963314 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 411 | 423 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 663 | 697 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 7.27E-103 |
| RefSeq | XP_022679943.1 | cysteine-rich receptor-like protein kinase 15 [Setaria italica] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 8.78E-94 | |
| TrEMBL | K4A2U1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3240, BH03.3426, BH03.3427, CH03.3631, CH03.3633 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570290, gene-QOZ80_7AG0570300 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040836 |
| Poaceae | Oryza coarctata | 2 | Oco13G009190, Oco13G009200 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g12850.1, LOC_Os07g34980.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G300600, gene-BS78_02G300700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304217 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G005280, Chr24G009130, Chr28G008530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G405900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028910, gene_TRIDC2BG032640 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217500.1, TraesCS2B02G243000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb106340_P001, Zm00001eb323200_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-820 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6569, Zma_g6571 |