Basic Information
Locus ID:
CH03.3631
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 46592662 | 46604979 | + | CH03.3631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 189,565.56 Da | 42.97 | 88.61 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1391 | 1657 | 1.71776E-87 | - |
| CDD | cd14066 | STKc_IRAK | 352 | 617 | 2.52767E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 157 | 250 | 3.0E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 1198 | 1289 | 1.0E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 700 | 970 | 7.8E-45 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1388 | 1656 | 1.2E-44 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 1076 | 1156 | 2.6E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 31 | 130 | 7.4E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 349 | 616 | 7.9E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 1000 | 6.34E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 617 | 5.26E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1359 | 1656 | 2.02E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 1185 | 1291 | 5.7E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 979 | 5.5E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1462 | 1665 | 1.8E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 624 | 2.9E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 775 | 9.3E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 151 | 253 | 1.1E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 133 | 6.0E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1068 | 1176 | 1.3E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 421 | 1.7E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1353 | 1461 | 3.8E-35 | - |
| SMART | SM00220 | serkin_6 | 346 | 615 | 7.4E-31 | IPR000719 |
| SMART | SM00220 | serkin_6 | 699 | 986 | 1.8E-27 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1385 | 1656 | 3.3E-28 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1064 | 1176 | 12.43351 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 632 | 37.516594 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 24 | 133 | 13.691751 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1185 | 1292 | 15.746578 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 254 | 16.117714 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 977 | 34.449516 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1385 | 1672 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1507 | 1519 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 1.08E-127 |
| RefSeq | XP_021309271.1 | cysteine-rich receptor-like protein kinase 15 [Sorghum bicolor] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 7.56E-126 | |
| TrEMBL | A0A0E0Q9C0 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3240, BH03.3426, BH03.3427, CH03.3631, CH03.3633 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570290, gene-QOZ80_7AG0570300 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040836 |
| Poaceae | Oryza coarctata | 2 | Oco13G009190, Oco13G009200 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g12850.1, LOC_Os07g34980.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G300600, gene-BS78_02G300700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304217 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G005280, Chr24G009130, Chr28G008530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G405900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028910, gene_TRIDC2BG032640 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217500.1, TraesCS2B02G243000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb106340_P001, Zm00001eb323200_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-820 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6569, Zma_g6571 |