Basic Information
Locus ID:
CH03.350
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 4771903 | 4772780 | + | CH03.350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 30,268.08 Da | 51.33 | 95.91 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 52 | 89 | 7.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 41 | 94 | 5.23E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 274 | 7.3E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 51 | 92 | 2.2E-6 | - |
| SMART | SM00256 | fbox_2 | 55 | 94 | 0.0033 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80960.5 | - | 7.14E-6 |
| RefSeq | XP_034579636.1 | uncharacterized protein LOC117843186 [Setaria viridis] | 2.35E-79 |
| TrEMBL | K3ZZM5 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G031400v2 PE=4 SV=1 | 1.17E-76 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||