Basic Information
Locus ID:
CH03.3348
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 44232190 | 44234962 | - | CH03.3348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 60,170.12 Da | 57.93 | 106.35 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 466 | 503 | 2.8E-5 | IPR006566 |
| SUPERFAMILY | SSF52047 | RNI-like | 282 | 350 | 1.04E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 127 | 183 | 5.89E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 360 | 2.4E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 73 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50270.1 | F-box/RNI-like/FBD-like domains-containing protein. | 2.55E-6 |
| RefSeq | XP_034583089.1 | uncharacterized protein LOC117846097 [Setaria viridis] | 1.66E-126 |
| TrEMBL | A0A2T7EW28 | FBD domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G360800 PE=4 SV=1 | 9.57E-131 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology