Basic Information
Locus ID:
CH03.3062
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 41902135 | 41906434 | - | CH03.3062 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 76,875.00 Da | 39.11 | 82.80 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 364 | 662 | 1.23779E-126 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 333 | 648 | 6.6E-96 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 364 | 672 | 1.8E-71 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 366 | 666 | 7.2E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 146 | - | - |
| Coils | Coil | Coil | 145 | 165 | - | - |
| Coils | Coil | Coil | 295 | 315 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039823038.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1 [Panicum virgatum] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5V6T0 | Hexosyltransferase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0018160 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology