Basic Information
Locus ID:
CH03.3060
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 41895142 | 41896424 | - | CH03.3060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 39,135.40 Da | 50.18 | 90.03 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 32 | 302 | 3.44274E-104 | - |
| Pfam | PF00069 | Protein kinase domain | 27 | 299 | 3.8E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 315 | 2.32E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 315 | 1.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 101 | 7.8E-30 | - |
| SMART | SM00220 | serkin_6 | 26 | 304 | 9.9E-32 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 10 | 311 | 7.0E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 304 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 54 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 1.32E-103 |
| RefSeq | XP_012699392.1 | PTI1-like tyrosine-protein kinase At3g15890 [Setaria italica] | 2.51E-244 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 1.09E-96 | |
| TrEMBL | A0A3L6T828 | PTI1-like tyrosine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM03G04220 PE=3 SV=1 | 1.84E-243 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology