Basic Information
Locus ID:
CH03.3
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 254753 | 259518 | - | CH03.3 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 52,768.69 Da | 46.56 | 88.14 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 330 | 424 | 8.7E-12 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 20 | 298 | 8.3E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 328 | 1.12E-64 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 324 | 453 | 2.41E-16 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 322 | 451 | 1.2E-21 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 317 | 3.6E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 90 | 2.5E-22 | - |
| SMART | SM00220 | serkin_6 | 19 | 298 | 2.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 308 | 36.145599 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 329 | 450 | 11.608718 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 48 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70740.1 | Protein kinase superfamily protein. | 5.36E-46 |
| RefSeq | XP_021302974.1 | probable serine/threonine-protein kinase PBL28 [Sorghum bicolor] | 1.29E-164 |
| Q9CAC3 | Cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana OX=3702 GN=CRK43 PE=2 SV=2 | 4.07E-45 | |
| TrEMBL | A0A1B6P5L4 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G004900 PE=3 SV=1 | 2.92E-163 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology