Basic Information
Locus ID:
CH03.2922
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 40783785 | 40786721 | - | CH03.2922 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 60,394.36 Da | 44.50 | 79.11 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 473 | 532 | 1.43032E-15 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 87 | 350 | 7.26423E-117 | - |
| Pfam | PF13499 | EF-hand domain pair | 399 | 458 | 5.1E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 88 | 351 | 3.1E-64 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 473 | 531 | 1.8E-12 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 362 | 4.86E-76 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 389 | 538 | 1.56E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 392 | 460 | 9.6E-48 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 369 | 531 | 9.6E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 179 | 362 | 3.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 178 | 4.3E-20 | - |
| SMART | SM00054 | efh_1 | 434 | 462 | 11.0 | IPR002048 |
| SMART | SM00220 | serkin_6 | 88 | 351 | 7.9E-84 | IPR000719 |
| SMART | SM00054 | efh_1 | 506 | 534 | 1.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 398 | 426 | 0.067 | IPR002048 |
| SMART | SM00054 | efh_1 | 470 | 498 | 0.0043 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 502 | 537 | 12.504936 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 351 | 44.654266 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 13.788124 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 94 | 117 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 515 | 527 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 71 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 1.4E-179 |
| RefSeq | XP_004957332.1 | calcium-dependent protein kinase 22 [Setaria italica] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 2.3E-248 | |
| TrEMBL | K3ZS19 | Calcium-dependent protein kinase 24 OS=Setaria italica OX=4555 GN=101754008 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology