Basic Information
Locus ID:
CH03.2833
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 40076644 | 40082805 | + | CH03.2833 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 143,972.73 Da | 46.93 | 74.89 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 745 | 1086 | 3.83084E-94 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 750 | 1077 | 6.6E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 722 | 1109 | 6.33E-57 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 353 | 727 | 3.14E-20 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 345 | 726 | 9.6E-14 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 727 | 1117 | 6.5E-99 | IPR036691 |
| SMART | SM00128 | i5p_5 | 743 | 1092 | 1.9E-82 | IPR000300 |
| SMART | SM00320 | WD40_4 | 641 | 678 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 341 | 382 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 601 | 639 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 422 | 461 | 130.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1272 | 1312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1285 | 1299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 239 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_039834921.1 | type I inositol polyphosphate 5-phosphatase 13-like [Panicum virgatum] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0W7L7 | IPPc domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG411746 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology