Basic Information
Locus ID:
CH03.2757
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 39528536 | 39530018 | + | CH03.2757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 38,744.28 Da | 38.63 | 73.34 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 85 | 115 | 1.86827E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 246 | 346 | 3.7E-18 | IPR000719 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 45 | 125 | 1.02E-9 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 187 | 345 | 2.6E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 187 | 243 | 9.8E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 37 | 124 | 4.6E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 347 | 2.2E-30 | - |
| SMART | SM00179 | egfca_6 | 85 | 124 | 4.8E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 161 | 347 | 16.909224 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 270 | 282 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 85 | 110 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 3.66E-68 |
| RefSeq | XP_034578996.1 | putative wall-associated receptor kinase-like 16 [Setaria viridis] | 9.59E-208 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 3.58E-67 | |
| TrEMBL | A0A4U6VXF5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G266500v2 PE=4 SV=1 | 2.17E-206 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36390, jg4144 |
| Poaceae | Echinochloa crus-galli | 1 | CH03.2757 |
| Poaceae | Oryza coarctata | 1 | Oco13G005450 |