Basic Information
Locus ID:
CH03.2664
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 38664655 | 38667906 | + | CH03.2664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 78,197.80 Da | 39.55 | 82.71 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 390 | 684 | 7.44811E-121 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 359 | 670 | 3.1E-88 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 390 | 696 | 1.57E-66 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 394 | 689 | 5.3E-43 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 114 | - | - |
| Coils | Coil | Coil | 269 | 289 | - | - |
| Coils | Coil | Coil | 321 | 341 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 7.19E-230 |
| RefSeq | XP_034582201.1 | probable galacturonosyltransferase 4 isoform X1 [Setaria viridis] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 6.91E-229 | |
| TrEMBL | A0A4U6W024 | Hexosyltransferase OS=Setaria viridis OX=4556 GN=SEVIR_2G258300v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology