halophFGD

Basic Information

Locus ID: CH03.2658

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: BTB POZ domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH03	38623999	38625231	-	CH03.2658

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.66	33,640.31 Da	44.06	90.16	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14733	BACK	271	300	2.87222E-5	-
CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	171	253	8.54287E-22	-
Pfam	PF00651	BTB/POZ domain	164	266	3.1E-19	IPR000210
SUPERFAMILY	SSF54695	POZ domain	153	268	7.32E-23	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	142	301	1.4E-35	IPR011333
SMART	SM00225	BTB_4	172	302	2.3E-16	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	172	231	15.142269	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G55760.1	BTB/POZ domain-containing protein.	1.29E-51
RefSeq	XP_044960719.1	BTB/POZ domain-containing protein At1g55760 [Hordeum vulgare subsp. vulgare]	3.68E-58
Swiss-Prot	Q680K8	BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1	1.25E-50
TrEMBL	A0A1E5WJ22	BTB/POZ domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001623 PE=4 SV=1	2.46E-82

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH03.2335, BH03.2467, BH03.2468, CH03.2658
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_6AG0539000