Basic Information
Locus ID:
CH03.2604
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 38144981 | 38149191 | - | CH03.2604 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 85,740.28 Da | 48.75 | 81.52 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 85 | 281 | 1.35803E-94 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 99 | 258 | 9.1E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 263 | 730 | 3.7E-172 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 334 | 592 | 2.05E-86 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 614 | 725 | 5.1E-24 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 76 | 291 | 2.41E-60 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 62 | 306 | 5.4E-87 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 505 | 591 | 1.5E-31 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 592 | 728 | 4.6E-38 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 332 | 504 | 5.4E-72 | - |
| SMART | SM00387 | HKATPase_4 | 98 | 260 | 6.6E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 51 | 741 | 5.7E-221 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 96 | 105 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 267 | 285 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 96 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 164 | 181 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 146 | 163 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 248 | 265 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 97 | 119 | 5.0E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 193 | 215 | 5.0E-60 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 73 | 725 | 25.157623 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_004957103.1 | heat shock protein 90-5, chloroplastic [Setaria italica] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | K3ZQW0 | HATPase_c domain-containing protein OS=Setaria italica OX=4555 GN=101763050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology