halophFGD

Basic Information

Locus ID: CH03.2539

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH03	37431580	37433885	-	CH03.2539

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.91	14,942.44 Da	57.96	86.20	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	67	121	3.5E-9	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	67	120	2.97E-14	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	67	121	3.0E-26	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	129	10.139038	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K03097 (casein kinase II subunit alpha [EC:2.7.11.1])

Pathway:

ko03008 (Ribosome biogenesis in eukaryotes) map03008 (Ribosome biogenesis in eukaryotes) map04064 (NF-kappa B signaling pathway) ko04137 (Mitophagy - animal) map04137 (Mitophagy - animal) ko04139 (Mitophagy - yeast) map04139 (Mitophagy - yeast) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04520 (Adherens junction) map04520 (Adherens junction) ko04712 (Circadian rhythm - plant) map04712 (Circadian rhythm - plant)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT2G23080.2	Protein kinase superfamily protein.	2.57E-33
RefSeq	XP_031277987.1	casein kinase II subunit alpha-2-like [Pistacia vera]	4.09E-33
Swiss-Prot	P28523	Casein kinase II subunit alpha OS=Zea mays OX=4577 GN=ACK2 PE=1 SV=1	4.04E-32
TrEMBL	A0A453BPR4	Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1	5.51E-32

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for CH03.2539.