Basic Information
Locus ID:
CH03.2421
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF3128)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 36333281 | 36333664 | - | CH03.2421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 14,859.91 Da | 54.16 | 53.07 | -0.69 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G25315.2 | Expressed protein. | 6.97E-34 |
| RefSeq | XP_004956963.1 | uncharacterized protein C227.17c isoform X2 [Setaria italica] | 2.36E-78 |
| TrEMBL | K3ZY35 | Uncharacterized protein OS=Setaria italica OX=4555 GN=101774392 PE=4 SV=1 | 5.34E-77 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg35963, jg8186 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_26047 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah011486 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g210910 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11903, Sbi_jg46847 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009468 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl80319, Sgl82778, Sgl82786 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000006352, gene:ENSEOMG00000022296 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.5AG0013160, CQ.Regalona.r1.5BG0013570 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30057250 |
| Apiaceae | Apium graveolens | 3 | Ag10G00653, Ag2G01028, AgUnG00348 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G009480 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103696330, gene-LOC103717681, gene-LOC120103912 |
| Asteraceae | Flaveria trinervia | 1 | Ftri6G25001 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G25315.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026551m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g23330.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g081730.2N, BniB05g011930.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1719 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g05940 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g12770 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.772 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G19595 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.2107, BH03.2304, CH03.2421 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0536810, gene-QOZ80_6BG0490110 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0083960.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_005439 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g34120.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G025600 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0105311, Pt_Chr0600690, Pt_Chr0600692, Pt_Chr0600694 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G014870 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G613300, Tel5E01G376900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG055300, gene_TRIDC1BG063380 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G375700.1.cds1, TraesCS1B02G396100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb314390_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-19729, nbis-gene-30674 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g30402, Zma_g30403, Zma_g32634 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1061, evm.TU.LG11.462 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g15660 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24136 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-17199, nbisL1-mrna-3073 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.203 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017897 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5776 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12067 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644533 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008527 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3797 |
| Zosteraceae | Zostera marina | 1 | Zosma05g09750.v3.1 |