HalophFGD

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Basic Information
Locus ID: CH03.2334
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH03 35359781 35361451 - CH03.2334
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
12.00 24,088.07 Da 59.38 60.22 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 181 218 - -
MobiDBLite mobidb-lite consensus disorder prediction 60 160 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 AH04.2283, BH04.2243, CH03.2334, CH04.2670
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ...
gene-QOZ80_9AG0692860, gene-QOZ80_9BG0718700, gene-QOZ80_9BG0718730
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.2HG0103900.1
Poaceae Oryza coarctata 4 Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920
Poaceae Oryza sativa 10 ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ...
LOC_Os11g46870.1, LOC_Os11g46880.1, LOC_Os11g46900.1, LOC_Os11g46950.1, LOC_Os11g47110.1, LOC_Os11g47140.1, LOC_Os11g47150.1
Poaceae Paspalum vaginatum 17 gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ...
gene-BS78_05G266800, gene-BS78_05G269800, gene-BS78_05G271400, gene-BS78_05G272500, gene-BS78_05G272800, gene-BS78_K099900, gene-BS78_K100000, gene-BS78_K171900, gene-BS78_K172000, gene-BS78_K172100, gene-BS78_K196500, gene-BS78_K197800, gene-BS78_K219000, gene-BS78_K235400
Poaceae Puccinellia tenuiflora 3 Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050
Poaceae Sporobolus alterniflorus 3 Chr07G013790, Chr0G006760, Chr31G008600
Poaceae Thinopyrum elongatum 1 Tel2E01G159400
Poaceae Triticum dicoccoides 7 gene_TRIDC2AG008000, gene_TRIDC2AG008010 ...
gene_TRIDC2AG008170, gene_TRIDC2BG005430, gene_TRIDC2BG009420, gene_TRIDC2BG009570, gene_TRIDC2BG009730
Poaceae Triticum aestivum 8 TraesCS2A02G071800.1, TraesCS2A02G071900.1 ...
TraesCS2B02G087300.1, TraesCS2B02G088100.1, TraesCS2D02G070600.1, TraesCS2D02G070700.1, TraesCS2D02G070800.1, TraesCSU02G009300.1
Poaceae Zoysia japonica 3 nbis-gene-18470, nbis-gene-18479, nbis-gene-37655
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.