Basic Information
Locus ID:
CH03.209
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 3003086 | 3007347 | - | CH03.209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 106,602.00 Da | 53.77 | 66.35 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 289 | 569 | 1.0E-41 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 37 | 224 | 3.4E-5 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 269 | 570 | 3.28E-68 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 8 | 209 | 2.3E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 272 | 366 | 9.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 367 | 576 | 1.0E-51 | - |
| SMART | SM00220 | serkin_6 | 286 | 571 | 5.2E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 580 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 292 | 320 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 783 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 813 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 881 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 775 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 2.12E-74 |
| RefSeq | XP_034579179.1 | L-type lectin-domain containing receptor kinase IX.1-like [Setaria viridis] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 2.06E-73 | |
| TrEMBL | A0A4U6VND0 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G020100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.131, BH03.146, BH04.1794, CH03.209 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G015000, gene-BS78_08G090500 |