HalophFGD

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Basic Information
Locus ID: CH03.204
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH03 2902756 2903983 + CH03.204
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.42 41,550.16 Da 48.09 86.04 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 17 56 2.5E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 75 3.01E-10 IPR036047
SUPERFAMILY SSF75011 3-carboxy-cis,cis-mucoante lactonizing enzyme 101 360 2.62E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052133834.1 uncharacterized protein LOC127752481, partial [Oryza glaberrima] 2.34E-60
TrEMBL A0A0E0IPL7 F-box domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 7.04E-60
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH04.1797, CH03.204
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.