Basic Information
Locus ID:
CH03.2036
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 31754631 | 31758678 | - | CH03.2036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 30,948.06 Da | 38.20 | 72.40 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A8T0VLX3 | Vomeronasal type-1 receptor OS=Panicum virgatum OX=38727 GN=PVAP13_2NG263900 PE=4 SV=1 | 5.87E-16 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1248s00003.v1.0 |
| Poaceae | Echinochloa crus-galli | 8 | AH03.1700, AH03.3767, BH01.2823, BH03.4047, CH03.2036 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0578090, gene-QOZ80_7BG0609390 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0122090.1.CDS1 |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_002817, gene-QYE76_039548, gene-QYE76_039634 ... |
| Poaceae | Oryza coarctata | 7 | Oco02G013000, Oco02G013010, Oco02G013020, Oco06G011720 ... |
| Poaceae | Oryza sativa | 9 | LOC_Os01g38690.1, LOC_Os01g38700.1, LOC_Os01g38710.1 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G164300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604504 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G011450, Chr11G010870, Chr27G015410, Chr27G015420 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G309500 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G156000.1.cds1, TraesCS2B02G181500.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17826 |