Basic Information
Locus ID:
CH03.2016
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 31568183 | 31572843 | + | CH03.2016 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 55,066.57 Da | 46.81 | 66.61 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 156 | 433 | 1.32323E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 154 | 430 | 2.8E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 458 | 1.64E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 236 | 455 | 1.8E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 130 | 235 | 3.1E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 150 | 445 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 279 | 291 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 156 | 188 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 30 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 1.0E-217 |
| RefSeq | XP_008651617.1 | putative protein kinase superfamily protein isoform X1 [Zea mays] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 9.61E-217 | |
| TrEMBL | A0A6G1DMD5 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020405 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology