Basic Information
Locus ID:
CH03.198
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 2831204 | 2835972 | + | CH03.198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 66,667.91 Da | 57.39 | 90.61 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 351 | 391 | 1.1E-5 | IPR001810 |
| Pfam | PF00646 | F-box domain | 18 | 57 | 2.5E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 351 | 404 | 1.44E-11 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 73 | 8.9E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 347 | 388 | 1.2E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 55 | 8.8E-6 | - |
| SMART | SM00256 | fbox_2 | 349 | 392 | 0.043 | IPR001810 |
| SMART | SM00256 | fbox_2 | 16 | 59 | 0.11 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039793086.1 | uncharacterized protein LOC120659091 [Panicum virgatum] | 5.04E-91 |
| TrEMBL | A0A835KJU4 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_016377 PE=4 SV=1 | 6.16E-111 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||