Basic Information
Locus ID:
CH03.1957
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 30641873 | 30645619 | - | CH03.1957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 80,364.63 Da | 62.39 | 75.84 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 388 | 663 | 1.3E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 690 | 3.1E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 675 | 9.7E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 471 | 7.2E-27 | - |
| SMART | SM00220 | serkin_6 | 387 | 667 | 2.0E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 675 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 393 | 423 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 347 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 1.58E-80 |
| RefSeq | XP_025801525.1 | L-type lectin-domain containing receptor kinase IX.1-like [Panicum hallii] | 6.59E-153 |
| Q2QRN7 | Probable kinase CHARK OS=Oryza sativa subsp. japonica OX=39947 GN=CHARK PE=2 SV=1 | 4.78E-88 | |
| TrEMBL | A0A2S3GZ37 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G234300 PE=3 SV=1 | 2.03E-151 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH03.1957.