Basic Information
Locus ID:
CH03.1955
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 30586364 | 30589763 | - | CH03.1955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 65,795.03 Da | 70.69 | 69.97 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 412 | 509 | 4.5E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 523 | 9.26E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 572 | 3.1E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 343 | 3.6E-14 | - |
| SMART | SM00220 | serkin_6 | 300 | 545 | 3.1E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 617 | 26.379004 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 429 | 441 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 328 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49270.1 | Protein kinase superfamily protein. | 1.14E-70 |
| RefSeq | XP_008652581.1 | proline-rich receptor-like protein kinase PERK7 [Zea mays] | 1.63E-97 |
| Q9XI96 | Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana OX=3702 GN=PERK7 PE=2 SV=1 | 1.11E-69 | |
| TrEMBL | A0A1E5WJR8 | Proline-rich receptor-like protein kinase PERK4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001352 PE=4 SV=1 | 7.62E-104 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH03.1955.