Basic Information
Locus ID:
CH03.1916
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 29988221 | 29991259 | - | CH03.1916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 102,282.78 Da | 32.77 | 103.61 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 671 | 931 | 3.1E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 66 | 2.7E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 286 | 593 | 1.48E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 660 | 937 | 1.75E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 352 | 7.38E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 653 | 747 | 4.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 311 | 1.5E-74 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 748 | 951 | 3.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 596 | 4.7E-73 | IPR032675 |
| SMART | SM00220 | serkin_6 | 669 | 941 | 3.9E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 481 | 504 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 217 | 241 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 193 | 67.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 669 | 948 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 792 | 804 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 6.15E-124 |
| RefSeq | XP_025801514.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 1.33E-247 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 5.98E-123 | |
| TrEMBL | A0A2T7ERA0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G222100 PE=3 SV=1 | 7.54E-247 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology