Basic Information
Locus ID:
CH03.1912
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 29882604 | 29884432 | + | CH03.1912 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 50,827.26 Da | 51.25 | 76.07 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 92 | 128 | 7.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 80 | 141 | 1.19E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 85 | 134 | 1.4E-6 | - |
| SMART | SM00256 | fbox_2 | 94 | 135 | 1.3E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 88 | 135 | 10.027357 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 92 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034583331.1 | uncharacterized protein LOC117846296 [Setaria viridis] | 1.04E-120 |
| TrEMBL | A0A835BUN4 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_029046 PE=4 SV=1 | 1.21E-121 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology