halophFGD

Basic Information

Locus ID: CH03.1908

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: F-box-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH03	29801642	29802811	+	CH03.1908

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.32	43,848.24 Da	51.07	81.95	-0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	5	42	4.7E-8	IPR001810
SUPERFAMILY	SSF81383	F-box domain	3	69	9.81E-12	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	3	47	1.3E-6	-
SMART	SM00256	fbox_2	7	48	0.0066	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051183977.1	uncharacterized protein LOC127298012 [Lolium perenne]	1.16E-50
TrEMBL	A0A1E5WNH1	F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000047 PE=4 SV=1	8.05E-212

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH03.1577, CH03.1908
Poaceae	Paspalum vaginatum	1	gene-BS78_02G152400
Poaceae	Zoysia japonica	1	nbis-gene-55959
Poaceae	Zoysia macrostachya	1	Zma_g32376