Basic Information
Locus ID:
CH03.1904
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 29743668 | 29745035 | + | CH03.1904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 46,732.38 Da | 46.08 | 72.21 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 198 | 294 | 2.7E-5 | IPR013187 |
| Pfam | PF00646 | F-box domain | 4 | 44 | 3.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 44 | 2.62E-5 | IPR036047 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 96 | 316 | 7.1E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052164997.1 | F-box protein At3g07870-like [Oryza glaberrima] | 2.02E-65 |
| TrEMBL | A0A835FGJ5 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_012297 PE=4 SV=1 | 1.15E-133 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology