Basic Information
Locus ID:
CH03.1681
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 24148290 | 24149255 | + | CH03.1681 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 34,317.75 Da | 38.49 | 85.79 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 309 | 5.2E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 312 | 9.21E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 129 | 8.0E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 320 | 3.3E-49 | - |
| SMART | SM00220 | serkin_6 | 40 | 309 | 6.1E-72 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 309 | 40.880489 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 69 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 1.34E-41 |
| RefSeq | XP_025803364.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 1.76E-197 |
| P34117 | Cyclin-dependent kinase 5 homolog OS=Dictyostelium discoideum OX=44689 GN=cdk5 PE=2 SV=2 | 6.09E-41 | |
| TrEMBL | A0A3L6TFH9 | Putative cyclin-dependent kinase F-2 OS=Panicum miliaceum OX=4540 GN=C2845_PM03G29700 PE=4 SV=1 | 3.87E-198 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology