Basic Information
Locus ID:
CH03.1480
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 19383903 | 19389643 | + | CH03.1480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 180,291.70 Da | 42.86 | 80.82 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 321 | 592 | 3.37467E-107 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1338 | 1597 | 2.11024E-130 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 340 | 578 | 2.2E-26 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1377 | 1541 | 2.9E-33 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 387 | 558 | 1.41E-27 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 342 | 577 | 5.8E-6 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1312 | 1597 | 5.75E-77 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1459 | 1598 | 7.0E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 385 | 558 | 8.7E-36 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1309 | 1456 | 2.8E-33 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1320 | 1598 | 5.8E-81 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1280 | 1597 | 56.015736 | IPR002498 |
| Coils | Coil | Coil | 294 | 314 | - | - |
| Coils | Coil | Coil | 431 | 451 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 2.5E-248 |
| RefSeq | XP_025802000.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Panicum hallii] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 2.43E-247 | |
| TrEMBL | A0A2S3GY29 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Panicum hallii OX=206008 GN=PAHAL_2G139900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology