Basic Information
Locus ID:
CH03.1214
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 15613302 | 15614747 | + | CH03.1214 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 49,281.68 Da | 45.02 | 91.25 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 9 | 84 | 7.62859E-17 | - |
| Pfam | PF02214 | BTB/POZ domain | 9 | 91 | 1.4E-7 | IPR003131 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 116 | 355 | 6.93E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 8 | 91 | 8.75E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 97 | 1.2E-12 | IPR011333 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 3.3E-90 |
| RefSeq | XP_004956044.1 | BTB/POZ domain-containing protein At5g41330 [Setaria italica] | 7.48E-302 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 3.19E-89 | |
| TrEMBL | A0A1E5VGD3 | BTB/POZ domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0014795 PE=4 SV=1 | 7.89E-306 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology