Basic Information
Locus ID:
CH03.1211
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 15596969 | 15598054 | + | CH03.1211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 38,700.02 Da | 50.55 | 88.23 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 58 | 328 | 1.2E-58 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 332 | 4.32E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 51 | 149 | 2.5E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 350 | 8.0E-52 | - |
| SMART | SM00220 | serkin_6 | 58 | 328 | 3.6E-81 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 328 | 44.357452 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 87 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 2.97E-39 |
| RefSeq | XP_004956043.1 | putative cyclin-dependent kinase F-2 [Setaria italica] | 1.25E-182 |
| P54666 | Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei OX=5702 GN=CRK3 PE=3 SV=1 | 3.53E-41 | |
| TrEMBL | K3ZV25 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101756009 PE=3 SV=1 | 2.82E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1060, CH03.1211 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_UnG0720890 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G085400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-1301 |