HalophFGD

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Basic Information
Locus ID: CH03.1073
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Calcium-binding EGF-like domain
Maps and Mapping Data
Chromosome Start End Strand ID
CH03 13337094 13338397 - CH03.1073
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.07 41,255.63 Da 50.03 75.18 -0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 44 77 3.9E-8 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G21250.1 cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. 2.39E-16
RefSeq XP_025876688.1 wall-associated receptor kinase 4-like [Oryza sativa Japonica Group] 1.28E-104
Swiss-Prot Q39191 Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 2.37E-15
TrEMBL B8BFY0 GUB_WAK_bind domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32877 PE=4 SV=1 7.58E-108
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH01.2581, AH03.451, AH05.917, AH08.1177, AH08.706, BH03.547 ...
BH03.1279, BH03.548, BH03.549, BH08.1147, CH03.1073, CH03.1438, CH08.1274
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.1HG0012140.1.CDS1 ...
HORVU.MOREX.r3.3HG0314070.1, HORVU.MOREX.r3.5HG0503880.1, HORVU.MOREX.r3.6HG0548400.1, HORVU.MOREX.r3.6HG0548410.1, HORVU.MOREX.r3.6HG0632750.1
Poaceae Lolium multiflorum 18 gene-QYE76_001012, gene-QYE76_004044, gene-QYE76_008427 ...
gene-QYE76_008653, gene-QYE76_008656, gene-QYE76_012929, gene-QYE76_016492, gene-QYE76_019328, gene-QYE76_019329, gene-QYE76_019331, gene-QYE76_019345, gene-QYE76_019348, gene-QYE76_019357, gene-QYE76_024744, gene-QYE76_024745, gene-QYE76_058469, gene-QYE76_058473, gene-QYE76_059559
Poaceae Oryza coarctata 2 Oco07G004170, Oco20G001500
Poaceae Oryza sativa 5 LOC_Os10g02720.1, LOC_Os10g09570.1, LOC_Os10g09620.1 ...
LOC_Os10g09690.1, LOC_Os10g09700.1
Poaceae Paspalum vaginatum 8 gene-BS78_05G024300, gene-BS78_05G024700, gene-BS78_K071100 ...
gene-BS78_05G039800, gene-BS78_05G182000, gene-BS78_08G013000, gene-BS78_08G013100, gene-BS78_K338100
Poaceae Puccinellia tenuiflora 9 Pt_Chr0106588, Pt_Chr0106613, Pt_Chr0500162, Pt_Chr0500822 ...
Pt_Chr0500824, Pt_Chr0505751, Pt_Chr0700233, Pt_Chr0700422, Pt_Chr0700614
Poaceae Sporobolus alterniflorus 6 Chr07G015030, Chr07G015050, Chr19G018710, Chr20G001700 ...
Chr29G002050, Chr31G007740
Poaceae Thinopyrum elongatum 19 Tel1E01G055300, Tel1E01G120300, Tel1E01G120400 ...
Tel3E01G149900, Tel5E01G701400, Tel5E01G702800, Tel5E01G706600, Tel6E01G008600, Tel6E01G153100, Tel6E01G761400, Tel6E01G761800, Tel6E01G762000, Tel6E01G762800, Tel7E01G001300, Tel7E01G004400, Tel7E01G005000, Tel7E01G052400, Tel7E01G054000, Telscf22901G000200
Poaceae Triticum dicoccoides 29 gene_TRIDC1AG001210, gene_TRIDC1BG000130 ...
gene_TRIDC1BG004720, gene_TRIDC1BG010000, gene_TRIDC2AG015970, gene_TRIDC2BG019290, gene_TRIDC2BG081600, gene_TRIDC2BG081610, gene_TRIDC3AG075490, gene_TRIDC3BG013760, gene_TRIDC3BG079810, gene_TRIDC3BG085960, gene_TRIDC4AG070430, gene_TRIDC5AG064190, gene_TRIDC5AG064200, gene_TRIDC5BG010460, gene_TRIDC5BG068770, gene_TRIDC5BG069010, gene_TRIDC5BG069430, gene_TRIDC6AG060300, gene_TRIDC6BG000280, gene_TRIDC6BG000320, gene_TRIDC6BG013160, gene_TRIDC6BG073080, gene_TRIDC6BG073130, gene_TRIDC7AG000010, gene_TRIDC7AG000080, gene_TRIDC7AG011990, gene_TRIDC7AG078190
Poaceae Triticum aestivum 52 TraesCS1A02G011900.1, TraesCS1A02G012000.1 ...
TraesCS1B02G004100.1, TraesCS1B02G032000.1.cds1, TraesCS1B02G043400.1, TraesCS1D02G005100.1, TraesCS1D02G010100.1, TraesCS2A02G129700.1, TraesCS2B02G151900.1, TraesCS2B02G563900.1, TraesCS2D02G002600.1, TraesCS3A02G533100.1, TraesCS3B02G098900.1, TraesCS3B02G595500.1, TraesCS3D02G083900.1, TraesCS4A02G448100.1, TraesCS5A02G445700.1, TraesCS5B02G043000.1, TraesCS5B02G452300.1, TraesCS5B02G454100.1, TraesCS5B02G454700.1, TraesCS5B02G455500.1, TraesCS5B02G458300.1, TraesCS6A02G061200.1, TraesCS6B02G003100.1.cds1, TraesCS6B02G055400.1, TraesCS6B02G095800.1, TraesCS6B02G460900.1, TraesCS6D02G000100.1.cds1, TraesCS6D02G001300.1, TraesCS6D02G010800.1, TraesCS6D02G063400.1, TraesCS6D02G069500.1, TraesCS6D02G395400.1, TraesCS6D02G395600.1, TraesCS6D02G395700.1, TraesCS6D02G395900.1, TraesCS7A02G000100.1, TraesCS7A02G062000.1, TraesCS7A02G103000.1, TraesCS7A02G565200.1, TraesCS7B02G074949.1, TraesCS7D02G545900.1, TraesCSU02G089200.1.cds1, TraesCSU02G156800.1, TraesCSU02G171400.1, TraesCSU02G178200.1.cds1, TraesCSU02G192000.1.cds1, TraesCSU02G211900.1, TraesCSU02G224100.1, TraesCSU02G230200.1.cds1, TraesCSU02G234200.1.cds1
Poaceae Zea mays 3 Zm00001eb172910_P001, Zm00001eb180130_P003 ...
Zm00001eb379780_P001
Poaceae Zoysia japonica 1 nbis-gene-49182
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