Basic Information
Locus ID:
CH03.1050
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thymidine
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 13022442 | 13025489 | - | CH03.1050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.10 | 47,875.31 Da | 49.92 | 74.23 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00722 | Glycosyl hydrolases family 16 | 270 | 325 | 5.2E-9 | IPR000757 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 271 | 336 | 6.86E-12 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 267 | 350 | 6.2E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 433 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11545.1 | xyloglucan endotransglucosylase/hydrolase 8. | 1.28E-27 |
| RefSeq | XP_039832148.1 | uncharacterized protein LOC120692794 isoform X3 [Panicum virgatum] | 1.15E-95 |
| Q8L9A9 | Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana OX=3702 GN=XTH8 PE=2 SV=2 | 1.25E-26 | |
| TrEMBL | A0A8T0WP71 | DUF295 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG509000 PE=4 SV=1 | 2.61E-94 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology