Basic Information
Locus ID:
CH03.1
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 11477 | 18085 | + | CH03.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 107,508.14 Da | 32.90 | 88.90 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 654 | 918 | 6.96863E-95 | - |
| Pfam | PF11721 | Malectin domain | 380 | 567 | 1.5E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 652 | 916 | 2.4E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 345 | 1.28E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 918 | 2.56E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 724 | 933 | 1.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 349 | 3.3E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 618 | 723 | 4.3E-37 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 377 | 572 | 1.8E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 228 | 2.1E-36 | IPR032675 |
| SMART | SM00220 | serkin_6 | 648 | 891 | 5.6E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 648 | 924 | 37.21978 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 768 | 780 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 955 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 955 | 984 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 2.69E-251 |
| RefSeq | XP_004955905.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X2 [Setaria italica] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 2.59E-250 | |
| TrEMBL | A0A8T0VGU2 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG114500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology