Basic Information
Locus ID:
CH02.577
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 4909267 | 4914854 | - | CH02.577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 69,635.12 Da | 34.24 | 98.83 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 1.7E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 312 | 581 | 9.3E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 131 | 189 | 8.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 198 | 2.04E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 585 | 3.55E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 220 | 1.1E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 604 | 4.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 280 | 387 | 2.7E-36 | - |
| SMART | SM00220 | serkin_6 | 311 | 584 | 3.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 594 | 35.69331 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 317 | 339 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 4.37E-254 |
| RefSeq | XP_034595933.1 | protein NSP-INTERACTING KINASE 3 isoform X1 [Setaria viridis] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 4.2E-253 | |
| TrEMBL | A0A4U6UHN2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G117600v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology